Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 FAM185BP-201ENST00000443595 716 ntBASIC18.1■□□□□ 0.49
PTPN1P18031 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.1■□□□□ 0.49
PTPN1P18031 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 AC096734.2-201ENST00000562054 433 ntBASIC18.1■□□□□ 0.49
PTPN1P18031 AC018845.2-201ENST00000568326 409 ntBASIC18.1■□□□□ 0.49
PTPN1P18031 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN1P18031 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN1P18031 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN1P18031 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN1P18031 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN1P18031 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN1P18031 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 AC023274.1-201ENST00000418278 595 ntBASIC18.09■□□□□ 0.49
PTPN1P18031 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN1P18031 CXCL1P1-201ENST00000502804 216 ntBASIC18.09■□□□□ 0.49
PTPN1P18031 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN1P18031 AC040169.1-201ENST00000565382 521 ntBASIC18.09■□□□□ 0.49
PTPN1P18031 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 AC010507.1-201ENST00000633895 436 ntBASIC18.09■□□□□ 0.49
PTPN1P18031 OR6D1P-202ENST00000641007 5290 ntBASIC18.09■□□□□ 0.49
PTPN1P18031 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN1P18031 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN1P18031 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN1P18031 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PTPN1P18031 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PTPN1P18031 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN1P18031 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN1P18031 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN1P18031 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN1P18031 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PTPN1P18031 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.08■□□□□ 0.49
PTPN1P18031 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTPN1P18031 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PTPN1P18031 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN1P18031 RHOQP3-201ENST00000437982 621 ntBASIC18.08■□□□□ 0.48
PTPN1P18031 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN1P18031 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN1P18031 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN1P18031 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN1P18031 REXO1L3P-201ENST00000622202 1288 ntBASIC18.08■□□□□ 0.48
PTPN1P18031 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN1P18031 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN1P18031 AL645608.8-201ENST00000606034 2086 ntBASIC18.08■□□□□ 0.48
PTPN1P18031 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN1P18031 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN1P18031 AC106820.2-201ENST00000563775 3264 ntBASIC18.08■□□□□ 0.48
PTPN1P18031 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN1P18031 AC092053.1-201ENST00000605787 1936 ntBASIC18.08■□□□□ 0.48
PTPN1P18031 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
PTPN1P18031 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.07■□□□□ 0.48
PTPN1P18031 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
PTPN1P18031 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
PTPN1P18031 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN1P18031 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms