Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 BX005266.1-201ENST00000473402 457 ntBASIC16.74■□□□□ 0.27
CDH1P12830 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.74■□□□□ 0.27
CDH1P12830 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH1P12830 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH1P12830 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 AL355877.3-201ENST00000622820 899 ntBASIC16.74■□□□□ 0.27
CDH1P12830 AC073592.4-201ENST00000623827 446 ntBASIC16.74■□□□□ 0.27
CDH1P12830 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDH1P12830 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH1P12830 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH1P12830 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH1P12830 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH1P12830 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH1P12830 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH1P12830 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH1P12830 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH1P12830 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 AC105020.1-201ENST00000435356 2205 ntBASIC16.73■□□□□ 0.27
CDH1P12830 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH1P12830 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH1P12830 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH1P12830 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 AL356309.3-201ENST00000624132 1934 ntBASIC16.72■□□□□ 0.27
CDH1P12830 UBALD1-205ENST00000590891 2641 ntBASIC16.72■□□□□ 0.27
CDH1P12830 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 PCDHB19P-201ENST00000570871 2371 ntBASIC16.72■□□□□ 0.27
CDH1P12830 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH1P12830 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 FGFR3P6-201ENST00000457012 610 ntBASIC16.72■□□□□ 0.27
CDH1P12830 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 AF238378.1-201ENST00000526806 358 ntBASIC16.72■□□□□ 0.27
CDH1P12830 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH1P12830 NKAPP1-205ENST00000585790 367 ntBASIC16.72■□□□□ 0.27
CDH1P12830 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH1P12830 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CDH1P12830 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH1P12830 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms