Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AL645608.8-201ENST00000606034 2086 ntBASIC18.75■□□□□ 0.59
CLTAP09496 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLTAP09496 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLTAP09496 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.75■□□□□ 0.59
CLTAP09496 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 PTCHD3P3-201ENST00000403073 906 ntBASIC18.75■□□□□ 0.59
CLTAP09496 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.75■□□□□ 0.59
CLTAP09496 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.75■□□□□ 0.59
CLTAP09496 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 Z83851.2-201ENST00000609564 659 ntBASIC18.75■□□□□ 0.59
CLTAP09496 ZNF259P1-201ENST00000407656 1365 ntBASIC18.75■□□□□ 0.59
CLTAP09496 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLTAP09496 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLTAP09496 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLTAP09496 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLTAP09496 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.74■□□□□ 0.59
CLTAP09496 AC104109.2-201ENST00000602919 1418 ntBASIC18.74■□□□□ 0.59
CLTAP09496 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLTAP09496 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLTAP09496 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
CLTAP09496 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.74■□□□□ 0.59
CLTAP09496 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLTAP09496 AP002414.1-201ENST00000391405 1147 ntBASIC18.74■□□□□ 0.59
CLTAP09496 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLTAP09496 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.74■□□□□ 0.59
CLTAP09496 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.74■□□□□ 0.59
CLTAP09496 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.74■□□□□ 0.59
CLTAP09496 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.74■□□□□ 0.59
CLTAP09496 AC008667.4-201ENST00000607370 168 ntBASIC18.74■□□□□ 0.59
CLTAP09496 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLTAP09496 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLTAP09496 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
CLTAP09496 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLTAP09496 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLTAP09496 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLTAP09496 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.73■□□□□ 0.59
CLTAP09496 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLTAP09496 AC009947.1-201ENST00000444350 727 ntBASIC18.73■□□□□ 0.59
CLTAP09496 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 AL023806.1-201ENST00000603994 1649 ntBASIC18.73■□□□□ 0.59
CLTAP09496 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.73■□□□□ 0.59
CLTAP09496 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLTAP09496 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLTAP09496 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.73■□□□□ 0.59
CLTAP09496 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.72■□□□□ 0.59
CLTAP09496 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLTAP09496 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms