Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 AJ011932.1-201ENST00000621707 465 ntBASIC17.64■□□□□ 0.41
RHOP08100 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.64■□□□□ 0.41
RHOP08100 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 SLC22A20-204ENST00000530038 1673 ntBASIC17.64■□□□□ 0.41
RHOP08100 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 TOP3BP1-201ENST00000420768 1380 ntBASIC17.64■□□□□ 0.41
RHOP08100 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 HTR7P1-202ENST00000624664 4411 ntBASIC17.63■□□□□ 0.41
RHOP08100 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 PMS2P4-201ENST00000412466 1052 ntBASIC17.63■□□□□ 0.41
RHOP08100 AC055876.3-201ENST00000431496 288 ntBASIC17.63■□□□□ 0.41
RHOP08100 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.63■□□□□ 0.41
RHOP08100 KLF2P3-201ENST00000451977 1087 ntBASIC17.63■□□□□ 0.41
RHOP08100 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.63■□□□□ 0.41
RHOP08100 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.63■□□□□ 0.41
RHOP08100 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 AC138761.1-201ENST00000584393 385 ntBASIC17.63■□□□□ 0.41
RHOP08100 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 AC138649.4-201ENST00000612222 287 ntBASIC17.63■□□□□ 0.41
RHOP08100 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.63■□□□□ 0.41
RHOP08100 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.63■□□□□ 0.41
RHOP08100 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 WASH6P-202ENST00000359512 1437 ntBASIC17.63■□□□□ 0.41
RHOP08100 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.63■□□□□ 0.41
RHOP08100 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHOP08100 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
RHOP08100 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHOP08100 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RHOP08100 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 RNU1-129P-201ENST00000384064 167 ntBASIC17.62■□□□□ 0.41
RHOP08100 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 MIR943-201ENST00000401286 94 ntBASIC17.62■□□□□ 0.41
RHOP08100 AC125807.1-201ENST00000483097 614 ntBASIC17.62■□□□□ 0.41
RHOP08100 INGX-202ENST00000489074 768 ntBASIC17.62■□□□□ 0.41
RHOP08100 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.62■□□□□ 0.41
RHOP08100 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.62■□□□□ 0.41
RHOP08100 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHOP08100 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.62■□□□□ 0.41
RHOP08100 AC026150.2-201ENST00000564693 1156 ntBASIC17.62■□□□□ 0.41
RHOP08100 AC091167.2-201ENST00000579581 588 ntBASIC17.62■□□□□ 0.41
RHOP08100 U1.21-201ENST00000580816 167 ntBASIC17.62■□□□□ 0.41
RHOP08100 AL031055.1-201ENST00000606362 631 ntBASIC17.62■□□□□ 0.41
RHOP08100 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RHOP08100 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHOP08100 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHOP08100 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.61■□□□□ 0.41
RHOP08100 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHOP08100 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RHOP08100 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
RHOP08100 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms