Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AL592309.1-201ENST00000443127 649 ntBASIC20.91■□□□□ 0.94
CSF1RP07333 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1RP07333 AC069335.1-201ENST00000489972 472 ntBASIC20.91■□□□□ 0.94
CSF1RP07333 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CSF1RP07333 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CSF1RP07333 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.91■□□□□ 0.94
CSF1RP07333 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.91■□□□□ 0.94
CSF1RP07333 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.91■□□□□ 0.94
CSF1RP07333 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.91■□□□□ 0.94
CSF1RP07333 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CSF1RP07333 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1RP07333 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CSF1RP07333 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1RP07333 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CSF1RP07333 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1RP07333 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSF1RP07333 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSF1RP07333 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CSF1RP07333 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.9■□□□□ 0.94
CSF1RP07333 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CSF1RP07333 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSF1RP07333 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.9■□□□□ 0.94
CSF1RP07333 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.9■□□□□ 0.94
CSF1RP07333 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.9■□□□□ 0.94
CSF1RP07333 CYP2A7P1-201ENST00000595391 815 ntBASIC20.9■□□□□ 0.94
CSF1RP07333 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.9■□□□□ 0.94
CSF1RP07333 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.9■□□□□ 0.94
CSF1RP07333 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.9■□□□□ 0.94
CSF1RP07333 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSF1RP07333 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CSF1RP07333 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CSF1RP07333 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.89■□□□□ 0.94
CSF1RP07333 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSF1RP07333 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1RP07333 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1RP07333 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.89■□□□□ 0.93
CSF1RP07333 GPS2P2-201ENST00000430745 888 ntBASIC20.89■□□□□ 0.93
CSF1RP07333 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CSF1RP07333 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.89■□□□□ 0.93
CSF1RP07333 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.89■□□□□ 0.93
CSF1RP07333 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.89■□□□□ 0.93
CSF1RP07333 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.89■□□□□ 0.93
CSF1RP07333 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 AP001350.2-201ENST00000625104 1094 ntBASIC20.89■□□□□ 0.93
CSF1RP07333 LINC00628-201ENST00000628516 1289 ntBASIC20.89■□□□□ 0.93
CSF1RP07333 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1RP07333 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSF1RP07333 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CSF1RP07333 AC141586.5-201ENST00000624546 2050 ntBASIC20.89■□□□□ 0.93
CSF1RP07333 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 WASH6P-202ENST00000359512 1437 ntBASIC20.88■□□□□ 0.93
CSF1RP07333 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSF1RP07333 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.88■□□□□ 0.93
CSF1RP07333 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.88■□□□□ 0.93
CSF1RP07333 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
CSF1RP07333 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSF1RP07333 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.88■□□□□ 0.93
CSF1RP07333 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSF1RP07333 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms