Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ADH5P3-201ENST00000433842 1137 ntBASIC20.1■□□□□ 0.81
HLA-DOAP06340 TIMM8BP1-201ENST00000452384 211 ntBASIC20.1■□□□□ 0.81
HLA-DOAP06340 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 AC099522.2-201ENST00000607001 744 ntBASIC20.1■□□□□ 0.81
HLA-DOAP06340 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DOAP06340 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DOAP06340 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 HMGA1P7-201ENST00000406908 502 ntBASIC20.09■□□□□ 0.81
HLA-DOAP06340 AL645939.2-201ENST00000427340 991 ntBASIC20.09■□□□□ 0.81
HLA-DOAP06340 HMGN1P19-201ENST00000436976 333 ntBASIC20.09■□□□□ 0.81
HLA-DOAP06340 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 RFPL4AP1-201ENST00000530883 850 ntBASIC20.09■□□□□ 0.81
HLA-DOAP06340 AC026120.1-201ENST00000611536 926 ntBASIC20.09■□□□□ 0.81
HLA-DOAP06340 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DOAP06340 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DOAP06340 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.08■□□□□ 0.81
HLA-DOAP06340 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 SLC25A1P3-201ENST00000395415 828 ntBASIC20.08■□□□□ 0.81
HLA-DOAP06340 HCG4-201ENST00000418983 998 ntBASIC20.08■□□□□ 0.81
HLA-DOAP06340 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOAP06340 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.08■□□□□ 0.81
HLA-DOAP06340 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.08■□□□□ 0.8
HLA-DOAP06340 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DOAP06340 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HLA-DOAP06340 TOP3BP1-201ENST00000420768 1380 ntBASIC20.08■□□□□ 0.8
HLA-DOAP06340 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.08■□□□□ 0.8
HLA-DOAP06340 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HLA-DOAP06340 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOAP06340 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 AC116353.5-201ENST00000638148 1699 ntBASIC20.07■□□□□ 0.8
HLA-DOAP06340 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOAP06340 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOAP06340 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOAP06340 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOAP06340 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 SPDYE11-202ENST00000450699 704 ntBASIC20.07■□□□□ 0.8
HLA-DOAP06340 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DOAP06340 SPDYE9P-201ENST00000570642 692 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms