Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-ND3P03897 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MT-ND3P03897 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.5■□□□□ 0.39
MT-ND3P03897 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 AP002383.4-201ENST00000442518 975 ntBASIC17.5■□□□□ 0.39
MT-ND3P03897 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 AC002558.1-201ENST00000488906 803 ntBASIC17.5■□□□□ 0.39
MT-ND3P03897 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-ND3P03897 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-ND3P03897 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-ND3P03897 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MT-ND3P03897 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-ND3P03897 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-ND3P03897 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MT-ND3P03897 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
MT-ND3P03897 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 DRAXINP1-201ENST00000437611 948 ntBASIC17.49■□□□□ 0.39
MT-ND3P03897 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.49■□□□□ 0.39
MT-ND3P03897 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-ND3P03897 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.49■□□□□ 0.39
MT-ND3P03897 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-ND3P03897 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-ND3P03897 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MT-ND3P03897 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-ND3P03897 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms