Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MT-ND1P03886 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AC113347.1-201ENST00000413321 391 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 HLA-F-220ENST00000434407 884 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 KRT18P48-201ENST00000434763 852 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 BX664615.1-201ENST00000443558 458 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.22■□□□□ 0.19
MT-ND1P03886 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.22■□□□□ 0.19
MT-ND1P03886 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AC012306.2-201ENST00000609350 630 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 AC005363.2-201ENST00000618631 242 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AC097493.4-201ENST00000641197 219 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
MT-ND1P03886 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MT-ND1P03886 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 FAM8A6P-201ENST00000407496 1135 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 SPDYE15P-201ENST00000424157 909 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 AL137013.1-201ENST00000432946 1228 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.21■□□□□ 0.19
MT-ND1P03886 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MT-ND1P03886 AC011558.1-201ENST00000623459 338 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 AC073912.3-201ENST00000624414 853 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-ND1P03886 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 CYP2T1P-202ENST00000641596 2535 ntBASIC16.21■□□□□ 0.19
MT-ND1P03886 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-ND1P03886 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-ND1P03886 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.21■□□□□ 0.18
MT-ND1P03886 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND1P03886 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MT-ND1P03886 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
MT-ND1P03886 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
MT-ND1P03886 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MT-ND1P03886 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.2■□□□□ 0.18
MT-ND1P03886 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 TERF1P1-201ENST00000311003 1181 ntBASIC16.2■□□□□ 0.18
MT-ND1P03886 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.2■□□□□ 0.18
MT-ND1P03886 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms