Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.42■■□□□ 1.18
LTN1O94822 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LTN1O94822 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LTN1O94822 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LTN1O94822 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.42■■□□□ 1.18
LTN1O94822 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.41■■□□□ 1.18
LTN1O94822 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.41■■□□□ 1.18
LTN1O94822 AC124947.2-201ENST00000547118 1133 ntBASIC22.41■■□□□ 1.18
LTN1O94822 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.41■■□□□ 1.18
LTN1O94822 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.41■■□□□ 1.18
LTN1O94822 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
LTN1O94822 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 NOC2LP1-202ENST00000452600 2235 ntBASIC22.41■■□□□ 1.18
LTN1O94822 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC22.41■■□□□ 1.18
LTN1O94822 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
LTN1O94822 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
LTN1O94822 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LTN1O94822 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.41■■□□□ 1.18
LTN1O94822 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
LTN1O94822 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 AC025048.6-201ENST00000634326 1161 ntBASIC22.4■■□□□ 1.18
LTN1O94822 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.4■■□□□ 1.18
LTN1O94822 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.4■■□□□ 1.18
LTN1O94822 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
LTN1O94822 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
LTN1O94822 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
LTN1O94822 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.4■■□□□ 1.18
LTN1O94822 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC22.4■■□□□ 1.18
LTN1O94822 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LTN1O94822 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
LTN1O94822 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
LTN1O94822 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
LTN1O94822 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
LTN1O94822 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC22.39■■□□□ 1.18
LTN1O94822 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LTN1O94822 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.39■■□□□ 1.18
LTN1O94822 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
LTN1O94822 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
LTN1O94822 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.39■■□□□ 1.18
LTN1O94822 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.39■■□□□ 1.17
LTN1O94822 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.39■■□□□ 1.17
LTN1O94822 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.39■■□□□ 1.17
LTN1O94822 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22.39■■□□□ 1.17
LTN1O94822 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.39■■□□□ 1.17
LTN1O94822 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LTN1O94822 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.39■■□□□ 1.17
LTN1O94822 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
LTN1O94822 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.38■■□□□ 1.17
LTN1O94822 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.38■■□□□ 1.17
LTN1O94822 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.38■■□□□ 1.17
LTN1O94822 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.38■■□□□ 1.17
LTN1O94822 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.38■■□□□ 1.17
LTN1O94822 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.38■■□□□ 1.17
LTN1O94822 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
LTN1O94822 AL390961.4-201ENST00000623958 2535 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms