Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 LAGE3P1-201ENST00000425356 484 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 AC079781.3-201ENST00000449110 356 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 KRT126P-201ENST00000549467 1181 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 AC004706.3-202ENST00000621574 984 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 PCDHA12-202ENST00000613593 2588 ntBASIC15.28■□□□□ 0.04
TRAF3IP2O43734 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP2O43734 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 AC092068.3-201ENST00000587894 2016 ntBASIC15.27■□□□□ 0.04
TRAF3IP2O43734 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 FAAHP1-202ENST00000446499 1238 ntBASIC15.27■□□□□ 0.04
TRAF3IP2O43734 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP2O43734 AC107918.4-202ENST00000641623 219 ntBASIC15.27■□□□□ 0.04
TRAF3IP2O43734 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP2O43734 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AC004870.1-201ENST00000315132 882 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AP002414.1-201ENST00000391405 1147 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 ELK2BP-201ENST00000415014 1224 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AC018712.1-201ENST00000455767 687 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AC073648.2-201ENST00000510116 352 ntBASIC15.26■□□□□ 0.03
TRAF3IP2O43734 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP2O43734 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms