Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COCHO43405 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COCHO43405 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 AC140658.5-201ENST00000438532 169 ntBASIC17.62■□□□□ 0.41
COCHO43405 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.62■□□□□ 0.41
COCHO43405 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.62■□□□□ 0.41
COCHO43405 AC112191.1-201ENST00000523689 701 ntBASIC17.62■□□□□ 0.41
COCHO43405 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COCHO43405 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 TOP3BP1-201ENST00000420768 1380 ntBASIC17.62■□□□□ 0.41
COCHO43405 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
COCHO43405 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COCHO43405 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
COCHO43405 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COCHO43405 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COCHO43405 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COCHO43405 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
COCHO43405 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 LINC02012-201ENST00000608206 1725 ntBASIC17.61■□□□□ 0.41
COCHO43405 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COCHO43405 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 HMGA1P7-201ENST00000406908 502 ntBASIC17.61■□□□□ 0.41
COCHO43405 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.61■□□□□ 0.41
COCHO43405 CNN2P11-201ENST00000429351 262 ntBASIC17.61■□□□□ 0.41
COCHO43405 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.61■□□□□ 0.41
COCHO43405 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.61■□□□□ 0.41
COCHO43405 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
COCHO43405 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COCHO43405 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 AL353732.1-201ENST00000569618 1459 ntBASIC17.61■□□□□ 0.41
COCHO43405 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 AC012569.1-201ENST00000591191 1524 ntBASIC17.61■□□□□ 0.41
COCHO43405 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
COCHO43405 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 SLC22A20-204ENST00000530038 1673 ntBASIC17.61■□□□□ 0.41
COCHO43405 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COCHO43405 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 AC002056.1-201ENST00000395613 760 ntBASIC17.6■□□□□ 0.41
COCHO43405 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.6■□□□□ 0.41
COCHO43405 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.6■□□□□ 0.41
COCHO43405 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.6■□□□□ 0.41
COCHO43405 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.6■□□□□ 0.41
COCHO43405 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COCHO43405 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COCHO43405 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms