Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MID1O15344 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.11■□□□□ 0.33
MID1O15344 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.11■□□□□ 0.33
MID1O15344 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.11■□□□□ 0.33
MID1O15344 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.11■□□□□ 0.33
MID1O15344 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MID1O15344 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.11■□□□□ 0.33
MID1O15344 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.11■□□□□ 0.33
MID1O15344 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MID1O15344 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 AC005332.8-201ENST00000622750 2735 ntBASIC17.1■□□□□ 0.33
MID1O15344 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.1■□□□□ 0.33
MID1O15344 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.1■□□□□ 0.33
MID1O15344 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.1■□□□□ 0.33
MID1O15344 AC112191.1-201ENST00000523689 701 ntBASIC17.1■□□□□ 0.33
MID1O15344 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.1■□□□□ 0.33
MID1O15344 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 AL355385.1-201ENST00000606123 409 ntBASIC17.1■□□□□ 0.33
MID1O15344 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.1■□□□□ 0.33
MID1O15344 REXO1L3P-201ENST00000622202 1288 ntBASIC17.1■□□□□ 0.33
MID1O15344 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MID1O15344 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.1■□□□□ 0.33
MID1O15344 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MID1O15344 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MID1O15344 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 PKD1P1-201ENST00000458669 6805 ntBASIC17.09■□□□□ 0.33
MID1O15344 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.09■□□□□ 0.33
MID1O15344 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 AC018470.1-201ENST00000624790 3129 ntBASIC17.09■□□□□ 0.33
MID1O15344 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.09■□□□□ 0.33
MID1O15344 AP000344.2-201ENST00000512987 629 ntBASIC17.09■□□□□ 0.33
MID1O15344 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.09■□□□□ 0.33
MID1O15344 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 AC027612.4-201ENST00000605371 583 ntBASIC17.09■□□□□ 0.33
MID1O15344 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.09■□□□□ 0.33
MID1O15344 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MID1O15344 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.09■□□□□ 0.33
MID1O15344 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
MID1O15344 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MID1O15344 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.08■□□□□ 0.33
MID1O15344 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms