Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXE1O00358 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXE1O00358 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXE1O00358 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXE1O00358 AC078925.2-201ENST00000624013 1973 ntBASIC16.33■□□□□ 0.2
FOXE1O00358 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXE1O00358 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
FOXE1O00358 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXE1O00358 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXE1O00358 PCDHB17P-201ENST00000539533 2393 ntBASIC16.33■□□□□ 0.2
FOXE1O00358 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXE1O00358 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.32■□□□□ 0.2
FOXE1O00358 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXE1O00358 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXE1O00358 AC021087.4-201ENST00000563761 564 ntBASIC16.32■□□□□ 0.2
FOXE1O00358 AC025062.2-201ENST00000605477 670 ntBASIC16.32■□□□□ 0.2
FOXE1O00358 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXE1O00358 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXE1O00358 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXE1O00358 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 PAWRP1-201ENST00000451083 565 ntBASIC16.31■□□□□ 0.2
FOXE1O00358 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 FLJ38576-201ENST00000623820 2459 ntBASIC16.31■□□□□ 0.2
FOXE1O00358 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXE1O00358 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXE1O00358 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXE1O00358 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXE1O00358 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXE1O00358 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXE1O00358 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXE1O00358 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXE1O00358 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.3■□□□□ 0.2
FOXE1O00358 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms