Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC254562.1-201ENST00000417586 456 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC112191.1-201ENST00000523689 701 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL031432.2-201ENST00000566714 459 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL928711.1-201ENST00000570165 459 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL596442.2-201ENST00000610240 980 ntBASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 REXO1L3P-201ENST00000622202 1288 ntBASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 OR6D1P-203ENST00000641209 4860 ntBASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC116353.5-201ENST00000638148 1699 ntBASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 MIR4515-201ENST00000584082 81 ntBASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C1QTNF3-AMACRE9PGA6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms