Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AC106886.4-201ENST00000623557 2502 ntBASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 FGFR3P6-201ENST00000457012 610 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 UNC93B7-201ENST00000509439 705 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SART3-203ENST00000546611 1184 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AL139288.1-201ENST00000623748 933 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AL022326.1-202ENST00000641533 845 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 GPR89P-201ENST00000407924 1495 ntBASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM6-TRIM34B2RNG4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AF238378.1-201ENST00000526806 358 ntBASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM6-TRIM34B2RNG4 PRYP5-201ENST00000451909 266 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms