Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 AC112191.1-201ENST00000523689 701 ntBASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 AP002472.1-201ENST00000577490 586 ntBASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 AL355385.1-201ENST00000606123 409 ntBASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TBC1D3FA6NER0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TBC1D3FA6NER0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TBC1D3FA6NER0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 AP000344.2-201ENST00000512987 629 ntBASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 AL645728.2-201ENST00000641974 660 ntBASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 AC008764.6-201ENST00000595909 2069 ntBASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TBC1D3FA6NER0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 AC002056.1-201ENST00000395613 760 ntBASIC17■□□□□ 0.31
TBC1D3FA6NER0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms