Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SLC25A6P4-201ENST00000586535 553 ntBASIC16.29■□□□□ 0.2
LRIT2A6NDA9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT2A6NDA9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 RPS15P9-201ENST00000494093 319 ntBASIC16.28■□□□□ 0.2
LRIT2A6NDA9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AL356488.2-201ENST00000602755 427 ntBASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AL121894.2-201ENST00000602977 491 ntBASIC16.28■□□□□ 0.2
LRIT2A6NDA9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AF228730.7-201ENST00000641842 219 ntBASIC16.28■□□□□ 0.2
LRIT2A6NDA9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 AP002414.3-201ENST00000589352 1468 ntBASIC16.28■□□□□ 0.2
LRIT2A6NDA9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT2A6NDA9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 DUX4L17-201ENST00000557360 1267 ntBASIC16.27■□□□□ 0.2
LRIT2A6NDA9 AL049840.3-201ENST00000602669 611 ntBASIC16.27■□□□□ 0.2
LRIT2A6NDA9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 MIR1199-201ENST00000621445 119 ntBASIC16.27■□□□□ 0.2
LRIT2A6NDA9 PGM5P2-202ENST00000637225 1043 ntBASIC16.27■□□□□ 0.2
LRIT2A6NDA9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 AD000864.1-201ENST00000624076 2295 ntBASIC16.27■□□□□ 0.2
LRIT2A6NDA9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRIT2A6NDA9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.27■□□□□ 0.19
LRIT2A6NDA9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.27■□□□□ 0.19
LRIT2A6NDA9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT2A6NDA9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT2A6NDA9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRIT2A6NDA9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms