Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CCDC66A2RUB6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC66A2RUB6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
CCDC66A2RUB6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC66A2RUB6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC66A2RUB6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 RASA4DP-201ENST00000460726 1199 ntBASIC18.64■□□□□ 0.57
CCDC66A2RUB6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 AL136038.4-201ENST00000603606 1261 ntBASIC18.64■□□□□ 0.57
CCDC66A2RUB6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.64■□□□□ 0.57
CCDC66A2RUB6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 AC009154.2-201ENST00000621177 724 ntBASIC18.64■□□□□ 0.57
CCDC66A2RUB6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC66A2RUB6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AL391807.1-203ENST00000604392 2365 ntBASIC18.63■□□□□ 0.57
CCDC66A2RUB6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AC087499.1-201ENST00000418141 1075 ntBASIC18.63■□□□□ 0.57
CCDC66A2RUB6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AC145285.6-201ENST00000604632 637 ntBASIC18.63■□□□□ 0.57
CCDC66A2RUB6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC66A2RUB6 AC104640.1-201ENST00000562617 2109 ntBASIC18.62■□□□□ 0.57
CCDC66A2RUB6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 AC079602.3-201ENST00000623931 403 ntBASIC18.62■□□□□ 0.57
CCDC66A2RUB6 AL023973.1-201ENST00000624619 620 ntBASIC18.62■□□□□ 0.57
CCDC66A2RUB6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 AL031432.5-201ENST00000641059 760 ntBASIC18.62■□□□□ 0.57
CCDC66A2RUB6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC66A2RUB6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms