Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ELK2BP-201ENST00000415014 1224 ntBASIC14.14□□□□□ -0.15
A0A1W2PRF3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC117500.6-201ENST00000624871 588 ntBASIC14.14□□□□□ -0.15
A0A1W2PRF3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
A0A1W2PRF3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.14□□□□□ -0.15
A0A1W2PRF3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 LINC00982-205ENST00000420957 435 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 RNA5SP415-201ENST00000517246 115 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 AC006557.2-201ENST00000592985 1240 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 AL356488.2-201ENST00000602755 427 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 NCF1C-201ENST00000438382 1427 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 AL135999.2-201ENST00000622438 1686 ntBASIC14.13□□□□□ -0.15
A0A1W2PRF3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.13□□□□□ -0.15
A0A1W2PRF3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
A0A1W2PRF3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 AC133963.1-201ENST00000504166 1679 ntBASIC14.12□□□□□ -0.15
A0A1W2PRF3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
A0A1W2PRF3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.12□□□□□ -0.15
A0A1W2PRF3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms