Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 LYSMD4-203ENST00000378904 2122 ntBASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.28■□□□□ 0.2
CLCA3PQ9Y6N3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 AC148477.5-201ENST00000625164 1645 ntBASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 AL773604.1-201ENST00000617417 272 ntBASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CLCA3PQ9Y6N3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 AC108860.2-201ENST00000562760 2183 ntBASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLCA3PQ9Y6N3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 AC011270.2-201ENST00000624293 2550 ntBASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 PP12613-201ENST00000424958 2230 ntBASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.26■□□□□ 0.19
CLCA3PQ9Y6N3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 AC046158.3-201ENST00000624947 2558 ntBASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 AC009078.2-202ENST00000463353 338 ntBASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.25■□□□□ 0.19
CLCA3PQ9Y6N3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms