Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AC124067.4-201ENST00000519691 2379 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 RHOQP3-201ENST00000437982 621 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 DDX43P3-201ENST00000441064 443 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AP000344.2-201ENST00000512987 629 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AC004877.2-201ENST00000623941 599 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 AC010507.1-201ENST00000633895 436 ntBASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA9Q9Y5G4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 KRT19P2-202ENST00000557173 1012 ntBASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AL353135.1-201ENST00000606729 504 ntBASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC007064.4-201ENST00000637740 555 ntBASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 AC009336.1-201ENST00000608941 1553 ntBASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA9Q9Y5G4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 BCAR1-209ENST00000546196 1340 ntBASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms