Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AL355312.1-201ENST00000407115 2176 ntBASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 ACTG1P14-201ENST00000446382 1122 ntBASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 PAWRP1-201ENST00000451083 565 ntBASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AC087163.2-201ENST00000457299 853 ntBASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.79■□□□□ 0.76
CTDP1Q9Y5B0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 METTL21AP1-201ENST00000438852 635 ntBASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CTDP1Q9Y5B0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 AC091812.2-201ENST00000619081 385 ntBASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 AC133963.1-201ENST00000504166 1679 ntBASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.77■□□□□ 0.76
CTDP1Q9Y5B0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTDP1Q9Y5B0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTDP1Q9Y5B0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.77■□□□□ 0.75
CTDP1Q9Y5B0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms