Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 LINC00982-205ENST00000420957 435 ntBASIC17.48■□□□□ 0.39
EBF1Q9UH73 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 AC004835.2-201ENST00000603762 682 ntBASIC17.48■□□□□ 0.39
EBF1Q9UH73 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 AL513210.1-201ENST00000629608 234 ntBASIC17.48■□□□□ 0.39
EBF1Q9UH73 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF1Q9UH73 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
EBF1Q9UH73 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 AL139400.1-201ENST00000366220 510 ntBASIC17.47■□□□□ 0.39
EBF1Q9UH73 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 SPCS2P1-201ENST00000561636 679 ntBASIC17.47■□□□□ 0.39
EBF1Q9UH73 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 AC091812.2-201ENST00000619081 385 ntBASIC17.47■□□□□ 0.39
EBF1Q9UH73 AC093028.1-201ENST00000622998 982 ntBASIC17.47■□□□□ 0.39
EBF1Q9UH73 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 REXO1L9P-201ENST00000604264 2108 ntBASIC17.47■□□□□ 0.39
EBF1Q9UH73 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EBF1Q9UH73 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF1Q9UH73 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 AC092902.6-201ENST00000641783 218 ntBASIC17.46■□□□□ 0.39
EBF1Q9UH73 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
EBF1Q9UH73 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF1Q9UH73 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 AC134043.2-201ENST00000624206 2238 ntBASIC17.45■□□□□ 0.38
EBF1Q9UH73 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EBF1Q9UH73 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms