Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 RCN1P2-201ENST00000398357 915 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 AL020989.1-201ENST00000422979 469 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 SIGLEC30P-201ENST00000455569 941 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 MIR3180-1-201ENST00000580374 94 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 MIR3180-3-201ENST00000584616 94 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 NPAP1P7-201ENST00000613027 823 ntBASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NEUROD4Q9HD90 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AP000867.3-201ENST00000524675 377 ntBASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AC092119.3-201ENST00000612618 583 ntBASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AP000867.4-201ENST00000641616 219 ntBASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AC005915.1-201ENST00000624912 2018 ntBASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 AC084018.2-201ENST00000613093 2607 ntBASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEUROD4Q9HD90 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 FLJ16779-201ENST00000612722 7638 ntBASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SPDYE21P-201ENST00000413323 827 ntBASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 ACTG1P4-201ENST00000425123 1122 ntBASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 RN7SL510P-201ENST00000581311 263 ntBASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEUROD4Q9HD90 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms