Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 TNRC18P3-201ENST00000441896 2691 ntBASIC15.32■□□□□ 0.04
NELFAQ9H3P2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NELFAQ9H3P2 AC093525.9-201ENST00000624961 1746 ntBASIC15.31■□□□□ 0.04
NELFAQ9H3P2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 TPM4P1-201ENST00000436100 807 ntBASIC15.31■□□□□ 0.04
NELFAQ9H3P2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 NKAPP1-205ENST00000585790 367 ntBASIC15.31■□□□□ 0.04
NELFAQ9H3P2 AL139288.1-201ENST00000623748 933 ntBASIC15.31■□□□□ 0.04
NELFAQ9H3P2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 AL356309.3-201ENST00000624132 1934 ntBASIC15.31■□□□□ 0.04
NELFAQ9H3P2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
NELFAQ9H3P2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms