Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 IGHV3-47-201ENST00000425060 335 ntBASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ATP5G2P1-201ENST00000433580 426 ntBASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 AC092119.3-201ENST00000612618 583 ntBASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC68Q9H2F9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 INTS4P1-201ENST00000438455 1935 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC009336.1-201ENST00000608941 1553 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MIR3180-1-201ENST00000580374 94 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MIR3180-3-201ENST00000584616 94 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC099336.1-202ENST00000602961 463 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 NPAP1P7-201ENST00000613027 823 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC114341.1-201ENST00000618070 349 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AC073592.5-201ENST00000624854 528 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC68Q9H2F9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 RCN1P2-201ENST00000398357 915 ntBASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 AD001527.2-201ENST00000622994 785 ntBASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 AD000864.1-201ENST00000624076 2295 ntBASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC68Q9H2F9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC68Q9H2F9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms