Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC003669.1-201ENST00000334569 611 ntBASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AL845331.1-201ENST00000424978 1190 ntBASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
POLR2J3Q9H1A7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 AC009336.1-201ENST00000608941 1553 ntBASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 KRT8P10-201ENST00000450021 1447 ntBASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
POLR2J3Q9H1A7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 STK19B-204ENST00000512515 211 ntBASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 AC011467.2-201ENST00000598425 242 ntBASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
POLR2J3Q9H1A7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms