Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 AC099336.1-202ENST00000602961 463 ntBASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 GPALPP1-207ENST00000611650 899 ntBASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPF3BQ9BZI7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 AC092329.2-201ENST00000598402 547 ntBASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
UPF3BQ9BZI7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 FRMD8P1-201ENST00000440433 1524 ntBASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 NUS1P2-201ENST00000417358 873 ntBASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 AC124947.2-201ENST00000547118 1133 ntBASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 AP000867.4-201ENST00000641616 219 ntBASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.48■□□□□ 0.87
UPF3BQ9BZI7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 NUS1P1-201ENST00000446295 882 ntBASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 AC012615.1-201ENST00000565797 1299 ntBASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UPF3BQ9BZI7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms