Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.3■□□□□ 0.2
CNTNAP3Q9BZ76 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AKAP8P1-201ENST00000434743 1349 ntBASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 MIR4453-201ENST00000584019 89 ntBASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 AL139099.5-201ENST00000635274 300 ntBASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNTNAP3Q9BZ76 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 AC140658.5-201ENST00000438532 169 ntBASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SNX29P1-201ENST00000548357 1007 ntBASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 AC132938.5-201ENST00000624980 1813 ntBASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 FEM1AP3-201ENST00000403722 1741 ntBASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNTNAP3Q9BZ76 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
CNTNAP3Q9BZ76 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms