Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 AL035633.1-201ENST00000406139 838 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 AC105233.2-201ENST00000523697 349 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 AF228730.5-201ENST00000530288 346 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 AC140878.1-201ENST00000565277 250 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 MIR6080-201ENST00000617359 66 ntBASIC26.3■■□□□ 1.8
FYCO1Q9BQS8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 AC107890.1-201ENST00000422478 521 ntBASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 AL158211.3-201ENST00000607385 239 ntBASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
FYCO1Q9BQS8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 IGHV3-62-201ENST00000520057 340 ntBASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 AC068880.1-201ENST00000507289 2297 ntBASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 TUBB3P1-201ENST00000405796 1332 ntBASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 AC008677.1-201ENST00000519230 1561 ntBASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FYCO1Q9BQS8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 AC093214.1-201ENST00000511688 1107 ntBASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FYCO1Q9BQS8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
FYCO1Q9BQS8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
FYCO1Q9BQS8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
FYCO1Q9BQS8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms