Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.22■□□□□ 0.03
VRK1Q99986 AL138831.2-201ENST00000606564 490 ntBASIC15.22■□□□□ 0.03
VRK1Q99986 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VRK1Q99986 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK1Q99986 AC125634.1-201ENST00000438758 1403 ntBASIC15.22■□□□□ 0.03
VRK1Q99986 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK1Q99986 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK1Q99986 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
VRK1Q99986 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VRK1Q99986 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VRK1Q99986 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK1Q99986 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK1Q99986 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.21■□□□□ 0.03
VRK1Q99986 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
VRK1Q99986 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VRK1Q99986 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK1Q99986 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.21■□□□□ 0.03
VRK1Q99986 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
VRK1Q99986 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK1Q99986 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK1Q99986 MRPL3P1-201ENST00000400109 1033 ntBASIC15.21■□□□□ 0.03
VRK1Q99986 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.21■□□□□ 0.03
VRK1Q99986 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK1Q99986 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.21■□□□□ 0.03
VRK1Q99986 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.21■□□□□ 0.03
VRK1Q99986 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.21■□□□□ 0.03
VRK1Q99986 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VRK1Q99986 PHGDH-209ENST00000641074 1780 ntBASIC15.21■□□□□ 0.02
VRK1Q99986 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK1Q99986 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK1Q99986 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK1Q99986 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK1Q99986 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 AC132938.6-201ENST00000623828 1655 ntBASIC15.2■□□□□ 0.02
VRK1Q99986 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 AF186996.4-201ENST00000467186 377 ntBASIC15.2■□□□□ 0.02
VRK1Q99986 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK1Q99986 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.2■□□□□ 0.02
VRK1Q99986 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.2■□□□□ 0.02
VRK1Q99986 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK1Q99986 MTDHP3-201ENST00000594186 672 ntBASIC15.2■□□□□ 0.02
VRK1Q99986 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK1Q99986 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VRK1Q99986 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK1Q99986 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms