Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ARID3AQ99856 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ARID3AQ99856 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ARID3AQ99856 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ARID3AQ99856 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 AC022616.7-201ENST00000525383 220 ntBASIC19.61■□□□□ 0.73
ARID3AQ99856 AC009065.1-201ENST00000564055 1225 ntBASIC19.61■□□□□ 0.73
ARID3AQ99856 AL049597.2-201ENST00000565575 961 ntBASIC19.61■□□□□ 0.73
ARID3AQ99856 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.61■□□□□ 0.73
ARID3AQ99856 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ARID3AQ99856 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.61■□□□□ 0.73
ARID3AQ99856 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ARID3AQ99856 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ARID3AQ99856 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.6■□□□□ 0.73
ARID3AQ99856 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ARID3AQ99856 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ARID3AQ99856 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ARID3AQ99856 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ARID3AQ99856 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.6■□□□□ 0.73
ARID3AQ99856 PVRIG2P-201ENST00000435460 978 ntBASIC19.6■□□□□ 0.73
ARID3AQ99856 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.6■□□□□ 0.73
ARID3AQ99856 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 AC007326.2-201ENST00000624224 7579 ntBASIC19.6■□□□□ 0.73
ARID3AQ99856 AC068587.6-202ENST00000641839 5619 ntBASIC19.6■□□□□ 0.73
ARID3AQ99856 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ARID3AQ99856 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.59■□□□□ 0.73
ARID3AQ99856 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 AL096828.2-201ENST00000567259 1965 ntBASIC19.59■□□□□ 0.73
ARID3AQ99856 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
ARID3AQ99856 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ARID3AQ99856 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.59■□□□□ 0.73
ARID3AQ99856 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ARID3AQ99856 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ARID3AQ99856 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ARID3AQ99856 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ARID3AQ99856 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.59■□□□□ 0.73
ARID3AQ99856 HYMAI.1-201ENST00000620949 238 ntBASIC19.59■□□□□ 0.73
ARID3AQ99856 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.59■□□□□ 0.73
ARID3AQ99856 AC144831.1-201ENST00000573312 2656 ntBASIC19.59■□□□□ 0.73
ARID3AQ99856 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ARID3AQ99856 AL391807.1-203ENST00000604392 2365 ntBASIC19.59■□□□□ 0.73
ARID3AQ99856 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms