Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NPAS2Q99743 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS2Q99743 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS2Q99743 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS2Q99743 PRELID1P1-202ENST00000567272 903 ntBASIC16.84■□□□□ 0.29
NPAS2Q99743 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.84■□□□□ 0.29
NPAS2Q99743 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NPAS2Q99743 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS2Q99743 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS2Q99743 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NPAS2Q99743 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.83■□□□□ 0.29
NPAS2Q99743 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS2Q99743 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS2Q99743 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 AL845331.1-201ENST00000424978 1190 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS2Q99743 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NPAS2Q99743 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS2Q99743 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS2Q99743 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 AC091607.1-201ENST00000490318 1060 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 AC113404.2-201ENST00000507884 177 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 UNC93B7-201ENST00000509439 705 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS2Q99743 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS2Q99743 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS2Q99743 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS2Q99743 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 LINC02012-201ENST00000608206 1725 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 AC124864.1-201ENST00000623408 392 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 BX276092.7-203ENST00000637198 1536 ntBASIC16.83■□□□□ 0.28
NPAS2Q99743 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS2Q99743 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS2Q99743 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NPAS2Q99743 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 AC233702.3-201ENST00000578656 1387 ntBASIC16.82■□□□□ 0.28
NPAS2Q99743 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS2Q99743 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS2Q99743 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS2Q99743 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS2Q99743 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS2Q99743 AC005104.2-201ENST00000427818 678 ntBASIC16.82■□□□□ 0.28
NPAS2Q99743 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms