Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC008687.7-202ENST00000637404 953 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 AC112907.3-201ENST00000577781 2400 ntBASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC5.13□□□□□ -1.59
HMCN1Q96RW7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 RN7SL11P-201ENST00000471305 293 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 RRP7BP-205ENST00000566851 833 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 EEF1DP1-201ENST00000585891 896 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SRD5A3P1-201ENST00000603021 949 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC097065.1-201ENST00000425737 517 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 COX6A1P2-201ENST00000620597 330 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 EP400NL-214ENST00000641289 2402 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AL589987.1-201ENST00000453380 819 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC245884.6-201ENST00000515672 1067 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC012158.2-201ENST00000536546 354 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MIR3147-201ENST00000577811 66 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 BX539320.1-201ENST00000623759 877 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CU634019.7-201ENST00000624153 1185 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FP236241.2-201ENST00000624906 1185 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 AC005412.3-201ENST00000580309 715 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 MIR4515-201ENST00000584082 81 ntBASIC5.12□□□□□ -1.59
HMCN1Q96RW7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC5.12□□□□□ -1.59
HMCN1Q96RW7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms