Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 AL355355.2-201ENST00000442321 338 ntBASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 KRT16P5-201ENST00000455284 522 ntBASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB3IPQ96QF0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 AC022532.1-201ENST00000624563 1728 ntBASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB3IPQ96QF0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB3IPQ96QF0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IPQ96QF0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms