Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 AL031008.1-201ENST00000619963 541 ntBASIC17.48■□□□□ 0.39
RTP4Q96DX8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTP4Q96DX8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTP4Q96DX8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AL590787.1-201ENST00000568856 1315 ntBASIC17.47■□□□□ 0.39
RTP4Q96DX8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AC138894.3-201ENST00000603787 634 ntBASIC17.47■□□□□ 0.39
RTP4Q96DX8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 AC092171.3-201ENST00000610122 2651 ntBASIC17.47■□□□□ 0.39
RTP4Q96DX8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.47■□□□□ 0.39
RTP4Q96DX8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTP4Q96DX8 LINC00895-201ENST00000629028 1637 ntBASIC17.47■□□□□ 0.39
RTP4Q96DX8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 HLA-A-202ENST00000376806 1854 ntBASIC17.46■□□□□ 0.39
RTP4Q96DX8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 AC132008.2-207ENST00000454517 770 ntBASIC17.46■□□□□ 0.39
RTP4Q96DX8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RTP4Q96DX8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTP4Q96DX8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTP4Q96DX8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms