Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ARRDC3Q96B67 RNF165-205ENST00000588679 2904 ntBASIC17.03■□□□□ 0.32
ARRDC3Q96B67 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 AC005412.3-201ENST00000580309 715 ntBASIC17.03■□□□□ 0.32
ARRDC3Q96B67 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 AL645728.2-201ENST00000641974 660 ntBASIC17.03■□□□□ 0.32
ARRDC3Q96B67 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARRDC3Q96B67 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 HMGA1P7-201ENST00000406908 502 ntBASIC17.02■□□□□ 0.32
ARRDC3Q96B67 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 MIR4515-201ENST00000584082 81 ntBASIC17.02■□□□□ 0.32
ARRDC3Q96B67 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARRDC3Q96B67 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.02■□□□□ 0.31
ARRDC3Q96B67 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
ARRDC3Q96B67 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ARRDC3Q96B67 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ARRDC3Q96B67 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARRDC3Q96B67 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.01■□□□□ 0.31
ARRDC3Q96B67 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.01■□□□□ 0.31
ARRDC3Q96B67 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
ARRDC3Q96B67 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms