Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCG3Q8WXD2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.63■□□□□ 0.41
SCG3Q8WXD2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG3Q8WXD2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AL596257.1-201ENST00000641463 2694 ntBASIC17.62■□□□□ 0.41
SCG3Q8WXD2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AKR1C7P-201ENST00000305623 895 ntBASIC17.62■□□□□ 0.41
SCG3Q8WXD2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AF238378.1-201ENST00000526806 358 ntBASIC17.62■□□□□ 0.41
SCG3Q8WXD2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 AC016396.2-201ENST00000562575 1417 ntBASIC17.62■□□□□ 0.41
SCG3Q8WXD2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCG3Q8WXD2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.61■□□□□ 0.41
SCG3Q8WXD2 AC132008.2-207ENST00000454517 770 ntBASIC17.61■□□□□ 0.41
SCG3Q8WXD2 AF186996.4-201ENST00000467186 377 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms