Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM4Q8WVI0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AC096633.1-201ENST00000422446 749 ntBASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM4Q8WVI0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 AC099063.4-201ENST00000641099 1602 ntBASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 AC024563.2-201ENST00000603282 481 ntBASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 REXO1L10P-201ENST00000615707 1290 ntBASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 REXO1L12P-201ENST00000622156 912 ntBASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms