Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 KRT8P44-201ENST00000441609 1350 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AL080243.2-201ENST00000418783 582 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AL512343.1-201ENST00000605837 169 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC003101.2-201ENST00000612557 442 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AC020907.1-201ENST00000616460 1350 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 AL023806.1-201ENST00000603994 1649 ntBASIC14.22□□□□□ -0.13
CCDC168Q8NDH2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 GNAQP1-201ENST00000444815 1067 ntBASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 RNA5SP423-201ENST00000517127 109 ntBASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TEX28P1-201ENST00000613479 1221 ntBASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 TEX28P2-201ENST00000617764 1221 ntBASIC14.21□□□□□ -0.13
CCDC168Q8NDH2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CCDC168Q8NDH2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 AC008735.3-201ENST00000596646 500 ntBASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC168Q8NDH2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms