Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 DNAJB3-202ENST00000449667 1266 ntBASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CD7-202ENST00000578509 925 ntTSL 3 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 AC211486.1-202ENST00000416371 468 ntBASIC26.55■■□□□ 1.84
VPS8Q8N3P4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 ACTG1P14-201ENST00000446382 1122 ntBASIC26.55■■□□□ 1.84
VPS8Q8N3P4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 AC211476.1-201ENST00000503899 468 ntBASIC26.55■■□□□ 1.84
VPS8Q8N3P4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 AP001160.2-201ENST00000596071 487 ntBASIC26.55■■□□□ 1.84
VPS8Q8N3P4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 AC027612.4-201ENST00000605371 583 ntBASIC26.55■■□□□ 1.84
VPS8Q8N3P4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS8Q8N3P4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 AL513210.1-201ENST00000629608 234 ntBASIC26.54■■□□□ 1.84
VPS8Q8N3P4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS8Q8N3P4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC26.53■■□□□ 1.84
VPS8Q8N3P4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
VPS8Q8N3P4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 AC006277.1-201ENST00000624348 1610 ntBASIC26.52■■□□□ 1.84
VPS8Q8N3P4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
VPS8Q8N3P4 AC002056.1-201ENST00000395613 760 ntBASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms