Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 EIF4HP1-201ENST00000453115 687 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AL022328.1-201ENST00000610050 478 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AC020765.3-201ENST00000613051 740 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 DUX4L45-201ENST00000566406 1057 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 RN7SL560P-201ENST00000577943 264 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AC010328.2-201ENST00000597698 1111 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 AL033527.5-202ENST00000641632 1098 ntBASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LTBP4Q8N2S1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 MIR33B-201ENST00000385104 96 ntBASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 AC104306.2-201ENST00000451877 341 ntBASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 ABBA01031660.1-201ENST00000635219 756 ntBASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC23.36■■□□□ 1.33
LTBP4Q8N2S1 FLJ13224-201ENST00000313737 1514 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 CHMP4BP1-201ENST00000556017 588 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 EGFEM1P-202ENST00000431685 1563 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 AL096828.2-201ENST00000567259 1965 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 LINC00896-202ENST00000609602 2128 ntBASIC23.35■■□□□ 1.33
LTBP4Q8N2S1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 YBX1P6-201ENST00000442962 1002 ntBASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 UPF3AP2-201ENST00000457924 1132 ntBASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 SDHAP3-202ENST00000515467 728 ntBASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 KRT8P12-202ENST00000472924 1397 ntBASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LTBP4Q8N2S1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LTBP4Q8N2S1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms