Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.53■□□□□ 0.4
SIX5Q8N196 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 SPCS2P4-201ENST00000436160 681 ntBASIC17.53■□□□□ 0.4
SIX5Q8N196 CRB3P1-201ENST00000449338 276 ntBASIC17.53■□□□□ 0.4
SIX5Q8N196 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.53■□□□□ 0.4
SIX5Q8N196 AC087163.2-201ENST00000457299 853 ntBASIC17.53■□□□□ 0.4
SIX5Q8N196 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SIX5Q8N196 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.53■□□□□ 0.4
SIX5Q8N196 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.53■□□□□ 0.4
SIX5Q8N196 AC027307.3-201ENST00000594262 1100 ntBASIC17.53■□□□□ 0.4
SIX5Q8N196 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 AL359881.2-201ENST00000602973 570 ntBASIC17.53■□□□□ 0.4
SIX5Q8N196 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.53■□□□□ 0.4
SIX5Q8N196 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIX5Q8N196 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SIX5Q8N196 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
SIX5Q8N196 UXT-AS1-201ENST00000590504 1525 ntBASIC17.52■□□□□ 0.4
SIX5Q8N196 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.52■□□□□ 0.4
SIX5Q8N196 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SIX5Q8N196 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 AKAP8P1-201ENST00000434743 1349 ntBASIC17.52■□□□□ 0.4
SIX5Q8N196 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.52■□□□□ 0.4
SIX5Q8N196 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SIX5Q8N196 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.52■□□□□ 0.4
SIX5Q8N196 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.52■□□□□ 0.4
SIX5Q8N196 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.52■□□□□ 0.4
SIX5Q8N196 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.52■□□□□ 0.4
SIX5Q8N196 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.52■□□□□ 0.4
SIX5Q8N196 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.52■□□□□ 0.4
SIX5Q8N196 AC026150.2-201ENST00000564693 1156 ntBASIC17.52■□□□□ 0.4
SIX5Q8N196 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.52■□□□□ 0.4
SIX5Q8N196 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.52■□□□□ 0.4
SIX5Q8N196 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIX5Q8N196 AC008894.3-201ENST00000624324 3103 ntBASIC17.52■□□□□ 0.4
SIX5Q8N196 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.52■□□□□ 0.4
SIX5Q8N196 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIX5Q8N196 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX5Q8N196 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.52■□□□□ 0.39
SIX5Q8N196 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.52■□□□□ 0.39
SIX5Q8N196 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SIX5Q8N196 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIX5Q8N196 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.52■□□□□ 0.39
SIX5Q8N196 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.52■□□□□ 0.39
SIX5Q8N196 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.52■□□□□ 0.39
SIX5Q8N196 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.52■□□□□ 0.39
SIX5Q8N196 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SIX5Q8N196 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 SPDYE7P-202ENST00000420373 878 ntBASIC17.51■□□□□ 0.39
SIX5Q8N196 HLA-V-201ENST00000429037 534 ntBASIC17.51■□□□□ 0.39
SIX5Q8N196 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX5Q8N196 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIX5Q8N196 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.51■□□□□ 0.39
SIX5Q8N196 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.51■□□□□ 0.39
SIX5Q8N196 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.51■□□□□ 0.39
SIX5Q8N196 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
SIX5Q8N196 AL158211.3-201ENST00000607385 239 ntBASIC17.51■□□□□ 0.39
SIX5Q8N196 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms