Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 AL589182.2-201ENST00000619332 1049 ntBASIC16.45■□□□□ 0.22
RAB43Q86YS6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 AL096828.2-201ENST00000567259 1965 ntBASIC16.45■□□□□ 0.22
RAB43Q86YS6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB43Q86YS6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB43Q86YS6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 AC003669.1-201ENST00000334569 611 ntBASIC16.44■□□□□ 0.22
RAB43Q86YS6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 AC136632.2-201ENST00000512891 861 ntBASIC16.44■□□□□ 0.22
RAB43Q86YS6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB43Q86YS6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB43Q86YS6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 AL353593.2-201ENST00000602529 1483 ntBASIC16.43■□□□□ 0.22
RAB43Q86YS6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 AL391005.1-201ENST00000623953 2435 ntBASIC16.43■□□□□ 0.22
RAB43Q86YS6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.43■□□□□ 0.22
RAB43Q86YS6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 AC040169.1-201ENST00000565382 521 ntBASIC16.43■□□□□ 0.22
RAB43Q86YS6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 BX276092.7-203ENST00000637198 1536 ntBASIC16.43■□□□□ 0.22
RAB43Q86YS6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
RAB43Q86YS6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB43Q86YS6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB43Q86YS6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RAB43Q86YS6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms