Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSMD2Q7Z408 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 AC142381.1-201ENST00000426099 345 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 ZNF890P-202ENST00000530367 1156 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 AC135586.1-201ENST00000539323 574 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 AC073592.8-201ENST00000624126 511 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 AC012569.1-201ENST00000591191 1524 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 ZNF767P-206ENST00000513792 565 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 MIR4515-201ENST00000584082 81 ntBASIC14.27□□□□□ -0.13
CSMD2Q7Z408 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD2Q7Z408 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 RARRES2P9-201ENST00000565168 469 ntBASIC14.26□□□□□ -0.13
CSMD2Q7Z408 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CSMD2Q7Z408 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ELK1P1-201ENST00000485699 580 ntBASIC14.25□□□□□ -0.13
CSMD2Q7Z408 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD2Q7Z408 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms