Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 KRT8P48-201ENST00000515599 1220 ntBASIC21.54■■□□□ 1.04
COPS6Q7L5N1 RFPL4AP1-201ENST00000530883 850 ntBASIC21.54■■□□□ 1.04
COPS6Q7L5N1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 FRMD8P1-201ENST00000440433 1524 ntBASIC21.54■■□□□ 1.04
COPS6Q7L5N1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.54■■□□□ 1.04
COPS6Q7L5N1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 CROCCP2-202ENST00000412962 2773 ntBASIC21.53■■□□□ 1.04
COPS6Q7L5N1 SLC22A20-204ENST00000530038 1673 ntBASIC21.53■■□□□ 1.04
COPS6Q7L5N1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 AC026120.1-201ENST00000611536 926 ntBASIC21.53■■□□□ 1.04
COPS6Q7L5N1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.53■■□□□ 1.04
COPS6Q7L5N1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AL353732.1-201ENST00000569618 1459 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 TOP3BP1-201ENST00000420768 1380 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 TSEN15P1-201ENST00000423257 515 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AL645939.2-201ENST00000427340 991 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 TIMM8BP1-201ENST00000452384 211 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AC093520.2-201ENST00000561830 333 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 AC093028.1-201ENST00000622998 982 ntBASIC21.52■■□□□ 1.04
COPS6Q7L5N1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.52■■□□□ 1.04
COPS6Q7L5N1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
COPS6Q7L5N1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPS6Q7L5N1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 PP12613-201ENST00000424958 2230 ntBASIC21.5■■□□□ 1.03
COPS6Q7L5N1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPS6Q7L5N1 CYMP-203ENST00000474680 1263 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms