Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 PCDHB18P-201ENST00000524813 2368 ntBASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 EGFEM1P-202ENST00000431685 1563 ntBASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 AC092902.6-201ENST00000641783 218 ntBASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 AC138932.1-201ENST00000534164 6830 ntBASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DCLRE1AQ6PJP8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 CNN2P11-201ENST00000429351 262 ntBASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 MIR4515-201ENST00000584082 81 ntBASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AC093525.9-201ENST00000624961 1746 ntBASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DCLRE1AQ6PJP8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 AC112191.1-201ENST00000523689 701 ntBASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DCLRE1AQ6PJP8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms