Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 AC004817.3-201ENST00000602957 2129 ntBASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 CROCCP2-202ENST00000412962 2773 ntBASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 AC018712.1-201ENST00000455767 687 ntBASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 AC093525.9-201ENST00000624961 1746 ntBASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC144NLQ6NUI1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 RPS2P1-201ENST00000434010 821 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AL353135.1-201ENST00000606729 504 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AC004706.3-202ENST00000621574 984 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 TP73-AS1-207ENST00000624167 988 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AC116353.5-201ENST00000638148 1699 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 GPR89P-201ENST00000407924 1495 ntBASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC144NLQ6NUI1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.92□□□□□ -0.18
CCDC144NLQ6NUI1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms