Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR3687-2-201ENST00000577708 61 ntBASIC18.03■□□□□ 0.48
RNF43Q68DV7 AL356488.2-201ENST00000602755 427 ntBASIC18.03■□□□□ 0.48
RNF43Q68DV7 MIR3687-1-201ENST00000614492 61 ntBASIC18.03■□□□□ 0.48
RNF43Q68DV7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 AC003669.1-201ENST00000334569 611 ntBASIC18.02■□□□□ 0.48
RNF43Q68DV7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 LAGE3P1-201ENST00000425356 484 ntBASIC18.02■□□□□ 0.48
RNF43Q68DV7 RPS2P1-201ENST00000434010 821 ntBASIC18.02■□□□□ 0.48
RNF43Q68DV7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF43Q68DV7 FAM197Y3-203ENST00000618346 717 ntBASIC18.02■□□□□ 0.48
RNF43Q68DV7 AC008735.5-201ENST00000623544 497 ntBASIC18.02■□□□□ 0.48
RNF43Q68DV7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF43Q68DV7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
RNF43Q68DV7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RNF43Q68DV7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF43Q68DV7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RNF43Q68DV7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF43Q68DV7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AL138688.1-201ENST00000624851 1594 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 RPSAP43-201ENST00000402237 625 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 AL020989.1-201ENST00000422979 469 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 KRT18P27-201ENST00000427733 1299 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AC012640.2-201ENST00000561606 901 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 AC145285.3-201ENST00000564603 959 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 OR6D1P-202ENST00000641007 5290 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.01■□□□□ 0.47
RNF43Q68DV7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF43Q68DV7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF43Q68DV7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18■□□□□ 0.47
RNF43Q68DV7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms