Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL033527.5-201ENST00000641382 801 ntBASIC16.47■□□□□ 0.23
RIF1Q5UIP0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 CETN4P-206ENST00000642099 2168 ntBASIC16.47■□□□□ 0.23
RIF1Q5UIP0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC044860.1-202ENST00000559481 777 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 MIR3909-201ENST00000579518 119 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 MIR3615-201ENST00000581999 87 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC126763.1-201ENST00000552015 2118 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC018665.1-201ENST00000622927 1362 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC099336.1-201ENST00000417053 1171 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 RPSAP52-203ENST00000622976 1023 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RIF1Q5UIP0 AC093525.8-201ENST00000624099 1342 ntBASIC16.46■□□□□ 0.23
RIF1Q5UIP0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RIF1Q5UIP0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RIF1Q5UIP0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RIF1Q5UIP0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 AC079328.1-201ENST00000560358 952 ntBASIC16.45■□□□□ 0.22
RIF1Q5UIP0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 MPRIPP1-201ENST00000452433 1089 ntBASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CROCCP4-201ENST00000457096 498 ntBASIC16.45■□□□□ 0.22
RIF1Q5UIP0 DOC2GP-202ENST00000514950 1163 ntBASIC16.45■□□□□ 0.22
RIF1Q5UIP0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RIF1Q5UIP0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 AC005229.1-201ENST00000392885 409 ntBASIC16.44■□□□□ 0.22
RIF1Q5UIP0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 MEP1AP4-201ENST00000423244 1087 ntBASIC16.44■□□□□ 0.22
RIF1Q5UIP0 LDHBP1-201ENST00000455730 1119 ntBASIC16.44■□□□□ 0.22
RIF1Q5UIP0 MIR8072-201ENST00000614241 80 ntBASIC16.44■□□□□ 0.22
RIF1Q5UIP0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RIF1Q5UIP0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms